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PDBsum entry 1jlc

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Pore analysis for: 1jlc calculated with MOLE 2.0 PDB id
1jlc
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.64 2.09 25.6 0.89 0.81 1.4 59 0 0 0 4 4 2 0  FTC 999 A
2 1.84 3.24 31.5 0.54 0.31 11.4 70 4 2 0 5 3 1 0  FTC 999 A
3 1.75 2.08 34.4 0.73 0.15 10.0 72 4 2 0 5 2 3 0  FTC 999 A
4 1.35 1.35 39.3 -1.16 -0.31 21.3 87 5 3 2 4 0 2 0  
5 1.16 1.44 70.4 -2.00 -0.34 29.8 78 8 7 3 2 2 2 0  
6 1.87 2.00 113.3 -1.62 -0.34 19.4 75 10 8 4 6 5 3 0  
7 1.29 1.68 113.1 -1.82 -0.33 21.3 74 13 8 7 8 5 0 0  
8 1.16 1.36 115.0 -1.45 -0.47 14.1 81 4 7 5 7 2 4 0  
9 1.21 3.93 142.7 -0.84 -0.02 12.2 78 9 6 10 12 7 5 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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