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PDBsum entry 1jkk

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Tunnel analysis for: 1jkk calculated with MOLE 2.0 PDB id
1jkk
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.19 1.83 21.8 1.29 0.45 12.2 83 1 3 1 7 1 0 0  ANP 300 A
2 1.19 1.19 24.8 0.53 0.14 16.6 88 1 3 1 9 1 0 0  ANP 300 A MG 510 A
3 1.19 1.75 25.1 0.86 0.41 13.2 80 2 2 1 7 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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