PDBsum entry 1jkf Go to PDB code:  Pore analysis for: 1jkf calculated with MOLE 2.0 PDB id 1jkf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.18 25.3 -0.69 -0.24 18.4 90 2 2 2 2 1 0 0   2 1.91 3.31 31.0 -2.66 -0.60 22.1 85 3 4 4 1 2 0 0   3 1.27 1.50 33.5 -2.05 -0.62 19.1 83 3 4 6 1 3 1 0   4 1.20 1.21 35.8 -2.08 -0.50 19.9 83 3 4 5 1 3 1 0   5 1.33 1.35 41.8 -1.58 -0.42 19.2 86 2 3 5 2 3 1 0   6 1.29 1.50 59.3 -1.67 -0.46 17.0 81 5 5 7 3 5 2 0   7 1.35 2.40 45.9 -0.30 -0.08 10.9 72 2 2 1 4 1 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.