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PDBsum entry 1jk8

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Protein chain A PDB id
1jk8
Protein chain A highlighted
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Jmol
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
3 sheets
7 beta hairpins
5 beta bulges
13 strands
2 helices
1 helix-helix interac
18 beta turns
2 gamma turns
1 disulphide
Chain 181 a.a.
Chain 190 a.a.
Chain 14 a.a.
  
Chain (181 residues)

UniProt code: P01909 (DQA1_HUMAN)   [Pfam]

structural classification (2 domains) :
Domain Links CATH no.   Class Architecture
1 3.10.320.10 = Alpha Beta Roll
2 2.60.40.10 = Mainly Beta Sandwich

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
Disulphides:   
    disulphide bond
Residue contacts:   
    to ligand
PDB SITE records:   
 AC1

Jmol
RasMol

FASTA
file
Domain 1
Topology diagram


Hera


Domain 2
Topology diagram


Hera


  Analysis of sequence's residue conservation
  Related protein sequences in the PDB
  
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