spacer
spacer

PDBsum entry 1jk8

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) clefts links
Cleft analysis for: 1jk8 PDB id
1jk8
View options
Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 6155.16 1.94 63.64 4 11.00 1 14.15 1 15 18 22 32 10 8 0  
2 3167.02 0.00 61.99 7 10.81 2 10.51 2 6 10 13 14 8 8 0  
3 728.16 0.00 61.33 8 6.07 9 8.13 3 4 2 3 1 1 3 0  
4 610.03 0.00 62.65 6 8.28 6 7.02 6 4 3 1 2 3 1 0  
5 606.66 0.00 63.02 5 7.73 8 5.81 10 2 2 5 3 2 1 0 NAG 401[A] (4 atoms)
6 473.77 0.00 67.53 2 9.13 4 7.98 4 2 2 2 6 1 0 0  
7 555.19 0.00 57.26 10 8.39 5 6.73 9 1 2 5 3 2 2 0  
8 551.81 0.00 64.39 3 7.98 7 7.39 5 2 2 4 6 2 0 0  
9 508.78 0.00 70.09 1 9.91 3 6.99 7 1 1 4 4 4 1 1  
10 429.47 0.00 61.06 9 5.85 10 6.79 8 1 1 8 0 0 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
spacer
spacer