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PDBsum entry 1j9w

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Tunnel analysis for: 1j9w calculated with MOLE 2.0 PDB id
1j9w
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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11 tunnels, coloured by tunnel radius 12 tunnels, coloured by tunnel radius 12 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.71 11.7 -2.02 0.12 31.9 90 5 0 2 1 1 0 0  
2 1.71 13.3 -1.83 0.12 27.8 79 5 0 3 3 2 1 0  
3 1.77 11.6 -1.83 -0.12 29.8 95 5 0 2 1 0 0 0  
4 1.75 11.6 -1.94 -0.07 31.6 90 5 0 2 1 1 0 0  
5 1.77 15.4 -1.71 -0.04 26.4 79 4 0 3 2 1 1 0  
6 1.76 15.4 -1.81 0.05 28.4 78 5 0 3 2 2 1 0  
7 1.44 10.1 -1.12 -0.48 10.1 88 1 1 3 1 1 0 0  
8 1.45 13.0 -0.83 -0.46 8.4 86 0 1 3 2 1 0 0  
9 1.73 7.5 0.24 -0.30 12.0 88 0 1 0 2 0 0 0  
10 2.22 3.6 -0.05 -0.52 2.6 70 0 0 1 1 1 1 0  
11 2.07 5.8 -0.18 -0.48 4.1 73 0 1 1 1 1 1 0  
12 1.61 6.5 -1.84 -0.79 5.3 82 1 0 3 0 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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