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PDBsum entry 1j38

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Top Page protein metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1j38 calculated with MOLE 2.0 PDB id
1j38
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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13 tunnels, coloured by tunnel radius 13 tunnels, coloured by tunnel radius 13 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.27 68.1 -2.32 -0.45 28.4 82 9 11 8 4 5 0 0  702 ZN B
2 1.28 73.0 -1.82 -0.33 26.2 78 9 12 7 7 6 0 1  702 ZN B
3 3.13 8.0 -1.12 -0.43 18.9 87 2 1 0 2 0 0 0  
4 3.00 9.7 -0.99 -0.23 21.0 80 3 0 0 3 0 0 0  
5 1.78 10.7 -1.05 -0.25 20.7 81 2 1 0 2 1 0 0  
6 1.72 12.4 -1.09 -0.13 23.0 76 3 0 0 3 1 0 0  
7 1.63 3.7 -1.83 -0.61 26.8 70 1 1 0 0 1 0 0  
8 1.86 6.7 -1.67 -0.23 28.6 73 2 2 0 0 1 0 0  
9 3.07 8.0 -0.93 -0.41 17.5 87 2 1 0 2 0 0 0  
10 3.00 9.6 -1.04 -0.28 20.6 80 3 0 0 3 0 0 0  
11 1.49 4.6 -0.44 0.35 11.9 64 1 1 0 0 2 0 0  
12 1.44 7.1 -0.81 0.16 17.6 64 1 1 0 0 2 0 0  
13 1.26 5.6 -2.21 -0.72 25.8 78 1 1 1 1 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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