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Ligand clusters for UniProt code P36924

Ligand clusters for P36924: Beta-amylase OS=Bacillus cereus GN=spoII PE=1 SV=2

Top 6 (of 8) ligand clusters
Cluster 1.
10 ligand types
17 ligands
Cluster 2.
5 ligand types
8 ligands
Cluster 3.
4 ligand types
6 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
2 ligand types
4 ligands
Representative protein: 1b90A  
 

Structures

PDB   Schematic diagram
1b90A    
1b9zA    
1j18A    
1venA    
1vepA    
 more ...

 

 Cluster 1 contains 10 ligand types

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Ligand Description


 
1. Ligand: MAL × 2
Maltose
PDB codes: 1b9z(A),


 
2. Ligand: EBG × 1
2-Hydroxymethyl-6-(2-Oxiranyl-Ethoxy)-Tetrahydro- Pyran-3,4,5-Triol
PDB code: 1j12(A).


 
3. Ligand: EPG × 1
2-Hydroxymethyl-6-Oxiranylmethoxy-Tetrahydro-Pyran-3, 4,5-Triol
PDB code: 1j11(A).


 
4. Ligand: GLC × 3
Alpha-D-Glucose
PDB codes: 1ven(A), 1veo(A).


 
5. Ligand: GLC-BGC × 3
GLC=Alpha-D-Glucose, BGC=Beta-D-Glucose.
PDB codes: 1j0z(A), 1veo(A), 1vep(A).


 
6. Ligand: GLC-GLC × 3
GLC=Alpha-D-Glucose.
PDB codes: 1vem(A), 1vep(A).


 
7. Ligand: BGC × 1
Beta-D-Glucose
PDB code: 1j0y(A).


 
8. Ligand: GLC-GLC-GLC-GLC × 1
GLC=Alpha-D-Glucose.
PDB code: 1j18(A).


 
9. Ligand: GLC-GLC-GLC-GLC-GLC × 1
GLC=Alpha-D-Glucose.
PDB code: 1itc(A).


 
10. Ligand: GLC-GLC-XYP × 1
GLC=Alpha-D-Glucose, XYP=Beta-D-Xylopyranose.
PDB code: 1j10(A).

 

 Cluster 2 contains 5 ligand types

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Ligand Description


 
1. Ligand: MAL × 1
Maltose
PDB code: 1b9z(A).


 
2. Ligand: GLC-GLC × 3
GLC=Alpha-D-Glucose.
PDB codes: 1vem(A), 1veo(A), 1vep(A).


 
3. Ligand: GLC-BGC × 2
GLC=Alpha-D-Glucose, BGC=Beta-D-Glucose.
PDB codes: 1j0z(A), 1j18(A).


 
4. Ligand: GLC-GLC-GLC-GLC × 1
GLC=Alpha-D-Glucose.
PDB code: 1itc(A).


 
5. Ligand: GLC-GLC-XYP × 1
GLC=Alpha-D-Glucose, XYP=Beta-D-Xylopyranose.
PDB code: 1j10(A).

 

 Cluster 3 contains 4 ligand types

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Ligand Description


 
1. Ligand: MAL × 1
Maltose
PDB code: 1b9z(A).


 
2. Ligand: GLC-GLC × 3
GLC=Alpha-D-Glucose.
PDB codes: 1vem(A), 1veo(A), 1vep(A).


 
3. Ligand: GLC-BGC × 1
GLC=Alpha-D-Glucose, BGC=Beta-D-Glucose.
PDB code: 1j18(A).


 
4. Ligand: GLC-GLC-GLC × 1
GLC=Alpha-D-Glucose.
PDB code: 1itc(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GLC-GLC-XYP × 1
GLC=Alpha-D-Glucose, XYP=Beta-D-Xylopyranose.
PDB code: 1j10(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GLC-GLC × 1
GLC=Alpha-D-Glucose.
PDB code: 1itc(A).

 

 Cluster 6 contains 2 ligand types

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Ligand Description


 
1. Ligand: ACT × 2
acetic acid
Acetate ion
PDB codes: 1b90(A), 1b9z(A).


 
2. Ligand: ACY × 2
Acetic acid
PDB codes: 1itc(A), 1j18(A).

 

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