 |
PDBsum entry 1izc
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 1izc calculated with  MOLE 2.0
|
PDB id
|
|
|
|
1izc
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
2 tunnels,
coloured by tunnel radius |
|
3 tunnels,
coloured by
tunnel radius
|
3 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.09 |
3.29 |
24.9 |
0.09 |
0.64 |
7.3 |
71 |
|
2 |
1 |
1 |
4 |
5 |
1 |
0 |
|
PYR 2001 A
|
 |
|
2 |
 |
1.08 |
3.29 |
28.8 |
0.35 |
0.67 |
3.9 |
72 |
2 |
0 |
2 |
6 |
5 |
1 |
0 |
PYR 2001 A
|
 |
3 |
 |
1.06 |
3.28 |
48.9 |
0.36 |
0.40 |
1.7 |
76 |
0 |
0 |
4 |
8 |
6 |
2 |
0 |
PYR 2001 A
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program