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PDBsum entry 1ivg

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Top Page protein ligands metals Protein-protein interface(s) clefts links
Cleft analysis for: 1ivg PDB id
1ivg
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 2664.56 1.14 70.95 2 10.58 5 12.00 1 11 9 15 13 2 5 2  
2 2327.48 0.00 74.18 1 11.55 2 11.58 2 9 9 13 8 3 6 0  
3 2178.14 0.00 67.65 5 13.27 1 11.36 3 6 6 11 6 4 6 4 NAG 472[B](1 atom)
4 2106.84 0.00 64.71 7 7.52 10 8.68 4 12 5 6 12 4 6 1  
5 1247.06 0.00 61.56 8 8.49 9 8.06 7 4 4 4 4 3 3 2 NAG 472[A](1 atom)
6 935.72 0.00 65.23 6 9.95 6 8.12 6 1 4 7 6 3 6 0 NAG 474[A] (6 atoms)
7 748.41 0.00 59.18 9 9.25 8 8.42 5 3 3 7 4 0 2 0  
8 742.50 0.00 59.12 10 9.26 7 7.07 9 2 3 7 4 0 2 0  
9 637.45 0.00 70.31 4 11.00 3 7.84 8 4 1 5 1 4 3 0  
10 637.45 0.00 70.38 3 10.92 4 6.96 10 4 1 5 1 4 3 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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