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PDBsum entry 1ivf

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Top Page protein ligands metals Protein-protein interface(s) clefts links
Cleft analysis for: 1ivf PDB id
1ivf
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 6101.58 3.47 64.32 7 11.44 3 12.86 1 17 12 21 18 9 10 10 NAG 472[A], NAG 472[B] (8 atoms)
2 1756.27 0.00 77.24 1 13.16 2 10.58 3 10 6 13 7 2 3 0 DAN 471[A] (20 atoms)
3 1754.58 0.00 77.12 2 13.17 1 11.76 2 10 6 12 7 2 3 0 DAN 471[B] (20 atoms)
4 1307.81 0.00 63.79 8 8.26 9 7.94 6 7 6 10 6 1 3 0 FUL 477[A] (4 atoms)
5 1228.08 0.00 60.65 9 9.03 8 7.23 9 3 4 4 5 3 7 0 NAG 474[A] (4 atoms)
6 756.42 0.00 67.54 5 10.01 5 10.08 4 3 1 7 5 1 3 0  
7 756.42 0.00 67.47 6 10.01 6 9.86 5 3 2 7 5 1 3 0  
8 817.59 0.00 58.74 10 6.37 10 7.67 7 3 4 6 5 0 2 0  
9 559.83 0.00 69.59 3 10.03 4 7.42 8 3 1 5 1 3 3 0  
10 559.83 0.00 69.59 4 9.95 7 7.01 10 3 1 5 1 3 3 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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