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PDBsum entry 1ivd

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Top Page protein ligands metals Protein-protein interface(s) links
Ligand/metal interactions PDB id
1ivd
Ligand highlighted
NAG-NAG-BMA-FUL
Ligands
NAG-NAG ×4
NAG 472(A) to NAG 473(A)
NAG 484(A) to NAG 485(A)
NAG-NAG-BMA-FUL
NAG 474(A) to FUL 477(A)
NAG-NAG-BMA-MAN-
MAN-MAN
×2
NAG 478(A) to MAN 483(A)
ST1 ×2
ST1 471(A)
NAG-NAG-BMA-FUC
NAG 474(B) to FUC 477(B)
Metals
_CA ×2
CA 470(A)
  
Ligand NAG-NAG-BMA-FUL

NAG - N-Acetyl-D-Glucosamine Formula: C8H15NO6
BMA - Beta-D-Mannose Formula: C6H12O6
FUL - Beta-L-Fucose [6-Deoxy-Beta-L-Galactose] Formula: C6H12O5
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
NAG 474(A) 15 15 1 1 Complete Chiral checks - OK
NAG 475(A) 15 15 1 0 Complete Chiral checks - OK
BMA 476(A) 12 12 1 0 Complete Chiral checks - OK
FUL 477(A) 11 11 1 0 Complete Chiral checks - OK
Additional Information

Jmol

LIGPLOT of interactions involving ligand NAG-NAG-BMA-FUL

Jmol




List of
interactions

NAG 474(A) to FUL 477(A)
  
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