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PDBsum entry 1iqp

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Pore analysis for: 1iqp calculated with MOLE 2.0 PDB id
1iqp
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 25 pores, coloured by radius 25 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.28 5.73 28.3 -3.32 -0.73 31.4 81 4 7 3 0 0 1 0  
2 2.40 2.60 30.5 -1.19 -0.24 22.1 81 3 4 2 3 1 1 0  
3 2.72 2.84 34.6 -1.15 -0.35 19.5 82 4 4 3 3 0 1 0  
4 3.11 5.02 35.2 -3.43 -0.68 36.8 78 8 7 3 0 1 2 0  
5 2.58 6.20 36.4 -3.48 -0.69 38.0 77 7 8 3 0 2 2 0  
6 2.20 4.37 39.3 -2.02 -0.45 20.3 76 5 4 3 1 1 1 0  
7 1.56 1.56 39.5 -1.86 -0.41 21.9 83 4 5 1 3 1 2 0  ADP 401 A
8 2.72 2.84 40.9 -2.08 -0.57 21.4 84 5 6 5 2 0 0 0  
9 1.56 1.55 42.3 -2.15 -0.49 24.4 85 5 7 3 3 1 1 0  ADP 401 A
10 1.72 1.94 42.3 -2.13 -0.66 27.6 80 4 7 2 3 0 1 0  
11 1.56 1.55 42.3 -2.01 -0.35 25.8 77 5 4 1 3 3 1 0  ADP 401 A
12 2.38 2.61 44.2 -0.74 -0.27 15.7 83 4 3 4 5 1 0 0  
13 2.24 4.55 50.0 -2.49 -0.75 23.1 84 6 6 5 1 1 0 0  
14 4.13 4.55 52.9 -1.51 -0.36 19.6 79 6 6 6 5 2 2 0  
15 1.36 1.49 53.4 -0.87 -0.32 17.2 86 6 6 5 9 0 1 0  
16 1.27 2.01 54.3 -1.15 -0.21 16.1 78 6 4 3 6 1 4 0  ADP 404 E
17 2.35 2.57 55.2 -1.76 -0.32 26.7 76 4 7 3 6 6 0 0  
18 1.37 1.50 56.5 -1.61 -0.49 19.2 88 6 6 7 8 0 0 0  
19 1.82 3.97 64.4 -1.59 -0.17 26.3 76 7 7 2 5 1 3 0  
20 1.25 2.04 67.9 -1.15 -0.40 16.8 83 7 6 5 6 1 2 0  ADP 404 E
21 3.12 5.01 71.0 -2.33 -0.52 24.8 78 9 9 7 5 2 3 0  
22 3.06 3.93 71.6 -1.63 -0.37 17.7 77 4 7 5 6 2 5 0  
23 3.03 3.92 77.1 -1.46 -0.45 19.4 81 7 8 6 6 2 3 0  
24 1.24 2.31 127.9 -1.75 -0.45 18.9 81 9 12 7 7 2 5 0  ADP 404 E
25 0.99 1.67 202.4 -1.73 -0.24 27.9 82 15 15 5 13 2 3 0  ADP 403 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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