PDBsum entry 1iqj Go to PDB code:  Tunnel analysis for: 1iqj calculated with MOLE 2.0 PDB id 1iqj Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.12 1.16 30.0 -0.28 -0.47 9.0 82 0 1 2 4 2 0 0  XMH 401 A 2 1.37 1.56 17.1 0.51 0.62 8.0 75 1 2 1 3 2 1 1   3 1.17 1.60 17.2 0.09 0.54 8.0 75 1 2 2 2 2 0 1   4 1.20 1.41 34.4 -0.95 -0.49 16.5 70 4 3 0 2 1 0 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.