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PDBsum entry 1imh
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Pore analysis for: 1imh calculated with  MOLE 2.0
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PDB id
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1imh
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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5 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.23 |
1.70 |
48.0 |
-2.07 |
-0.53 |
20.3 |
77 |
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5 |
1 |
3 |
1 |
1 |
1 |
1 |
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DA 5001 B DA 5002 B DC 5003 B
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2 |
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2.25 |
2.57 |
54.8 |
-1.59 |
-0.63 |
14.6 |
86 |
5 |
0 |
4 |
0 |
0 |
0 |
0 |
DA 4008 A DA 4009 A DA 4010 A DG 4015 A DA 5005 B
DT 5006 B DA 5013 B DG 5014 B
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3 |
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1.93 |
2.02 |
57.3 |
-1.64 |
-0.74 |
4.0 |
86 |
2 |
0 |
9 |
2 |
0 |
2 |
0 |
DG 4006 A DG 4007 A DA 4008 A DA 4009 A DA 4010 A
DA 4011 A DA 4012 A DC 5003 B DT 5004 B DA 5005 B
DT 5006 B DT 5007 B DT 5008 B
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4 |
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1.93 |
2.03 |
57.9 |
-1.67 |
-0.71 |
7.6 |
86 |
3 |
0 |
5 |
1 |
0 |
1 |
0 |
DG 4006 A DG 4007 A DA 4008 A DA 4009 A DA 4010 A
DG 4015 A DA 5005 B DT 5006 B DT 5007 B DT 5008 B
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5 |
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2.55 |
2.69 |
64.9 |
-1.35 |
-0.67 |
9.1 |
84 |
3 |
0 |
5 |
3 |
0 |
1 |
0 |
DA 4008 A DA 4009 A DA 4010 A DA 4011 A DA 4012 A
DC 5003 B DT 5004 B DA 5005 B DC 5012 B DA 5013 B
DG 5014 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program