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PDBsum entry 1iky

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Pore analysis for: 1iky calculated with MOLE 2.0 PDB id
1iky
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.27 1.33 27.6 0.98 0.57 2.4 66 1 0 2 4 4 2 0  MSD 2000 A
2 1.27 1.59 33.2 -1.13 -0.11 18.0 72 5 6 0 4 4 2 0  
3 2.45 4.02 56.3 -2.95 -0.47 32.4 72 6 3 1 0 1 3 0  
4 1.25 1.28 69.9 -1.41 -0.46 18.0 81 11 4 5 7 6 3 0  
5 1.29 2.84 92.8 -2.43 -0.42 24.9 73 11 6 6 3 4 1 0  
6 1.25 1.28 97.5 -1.89 -0.44 25.3 80 17 7 3 8 4 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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