spacer
spacer

PDBsum entry 1if4

Go to PDB code: 
Top Page protein ligands metals tunnels links
Tunnel analysis for: 1if4 calculated with MOLE 2.0 PDB id
1if4
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.10 13.2 -1.69 -0.26 14.0 86 3 0 4 1 2 1 0  555 FBS A
2 1.37 6.2 3.87 1.14 0.1 61 0 0 0 6 0 0 0  
3 1.36 9.8 3.87 1.14 0.1 61 0 0 0 6 0 0 0  
4 1.39 5.9 0.38 -0.27 5.0 63 0 1 0 1 1 0 0  
5 1.74 8.3 -1.89 -0.62 14.3 75 3 0 2 0 0 1 0  
6 1.94 11.2 -0.62 0.20 16.3 55 1 1 0 0 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer