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PDBsum entry 1ibq

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1ibq calculated with MOLE 2.0 PDB id
1ibq
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.71 2.71 26.6 -1.33 -0.29 7.7 77 0 2 3 0 3 1 0  
2 2.35 2.52 36.2 -0.82 -0.18 13.8 72 0 4 1 4 4 1 0  
3 2.35 2.55 36.4 -0.20 -0.09 13.9 77 0 4 2 4 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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