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PDBsum entry 1ia0

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Pore analysis for: 1ia0 calculated with MOLE 2.0 PDB id
1ia0
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.97 4.41 85.9 -1.43 -0.20 24.1 79 7 6 2 9 2 0 1  
2 1.13 1.31 131.1 -0.47 -0.13 11.8 84 9 6 8 14 4 4 0  
3 1.18 1.33 144.0 -1.18 -0.47 18.5 79 6 11 7 5 3 3 1  GDP 501 B
4 1.33 1.70 151.9 -1.71 -0.40 19.4 84 8 10 10 7 4 2 0  ACP 503 K
5 1.19 1.36 174.7 -0.58 -0.14 15.4 82 12 9 7 21 4 4 0  
6 1.21 1.55 199.7 -1.76 -0.28 24.4 77 13 13 6 6 5 4 1  GTP 500 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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