PDBsum entry 1i2d Go to PDB code:  Pore analysis for: 1i2d calculated with MOLE 2.0 PDB id 1i2d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.70 5.60 35.0 -1.72 -0.01 30.1 69 5 5 0 4 2 4 0   2 4.59 4.83 36.3 -1.65 0.33 29.5 66 6 5 0 4 4 3 0   3 2.81 3.37 65.8 -2.19 -0.75 23.9 89 6 5 7 0 1 0 0   4 1.82 1.82 68.3 -1.49 -0.61 13.8 91 5 2 6 3 0 1 0   5 1.16 1.17 26.2 -1.09 0.06 17.5 83 4 1 2 4 3 1 0  ADX 579 C 6 1.17 1.17 39.9 -1.63 -0.18 21.7 85 7 2 3 4 2 1 0  ADX 579 C 7 1.22 1.22 30.7 -1.21 0.03 20.6 83 4 3 2 4 3 1 0  ADX 575 A 8 1.20 1.37 38.7 -1.71 -0.17 24.5 83 7 4 2 4 1 1 0  ADX 575 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.