 |
PDBsum entry 1hys
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 1hys calculated with MOLE 2.0
|
PDB id
|
|
|
|
1hys
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
11 pores,
coloured by radius |
 |
11 pores,
coloured by radius
|
11 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
3.62 |
3.62 |
43.6 |
-0.73 |
-0.80 |
7.9 |
80 |
 |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
 |
U 854 E C 855 E A 856 E G 857 E C 858 E C 859 E A 860 E C 861 E U 862 E U 863 E U 864 E DT 887 F DA 890 F DA 891 F DA 892 F DT 894 F DG 895 F DG 896 F DG 899 F
|
 |
 |
2 |
 |
1.83 |
1.99 |
47.9 |
-0.72 |
-0.48 |
10.9 |
75 |
1 |
2 |
0 |
1 |
2 |
1 |
0 |
U 854 E C 855 E A 856 E G 857 E C 858 E C 859 E D A 890 F DA 891 F DA 892 F DT 894 F DG 895 F DG 896 F DG 899 F
|
 |
3 |
 |
1.28 |
3.25 |
51.7 |
-1.16 |
-0.52 |
15.8 |
79 |
3 |
4 |
0 |
2 |
2 |
2 |
0 |
C 859 E A 860 E C 861 E U 863 E U 864 E DT 887 F DA 890 F
|
 |
4 |
 |
1.23 |
2.29 |
61.2 |
-1.09 |
-0.32 |
19.9 |
73 |
4 |
4 |
4 |
8 |
0 |
0 |
0 |
U 863 E U 864 E DT 887 F
|
 |
5 |
 |
1.17 |
1.33 |
72.9 |
-1.09 |
-0.16 |
23.0 |
76 |
7 |
6 |
2 |
6 |
3 |
2 |
0 |
|
 |
6 |
 |
1.24 |
1.44 |
93.9 |
-1.56 |
-0.27 |
25.7 |
76 |
10 |
6 |
2 |
6 |
3 |
3 |
0 |
|
 |
7 |
 |
3.34 |
3.65 |
97.7 |
-1.64 |
-0.61 |
17.6 |
81 |
8 |
4 |
3 |
2 |
1 |
1 |
0 |
U 854 E C 855 E A 856 E G 857 E C 858 E A 867 E A 868 E A 869 E A 870 E A 872 E DT 879 F DT 880 F DT 881 F DT 882 F DA 890 F DA 891 F DA 892 F DT 894 F DG 895 F DG 896 F DG 899 F
|
 |
8 |
 |
3.88 |
3.88 |
102.9 |
-1.71 |
-0.62 |
18.6 |
83 |
9 |
5 |
4 |
3 |
1 |
1 |
0 |
C 859 E A 860 E C 861 E U 862 E U 863 E U 864 E A 867 E A 868 E A 869 E A 870 E A 872 E DT 879 F DT 880 F DT 881 F DT 882 F DT 887 F DA 890 F DA 891 F DA 892 F
|
 |
9 |
 |
1.34 |
3.04 |
103.5 |
-1.53 |
-0.47 |
17.5 |
79 |
8 |
6 |
3 |
3 |
3 |
3 |
0 |
C 859 E A 867 E A 868 E A 869 E A 870 E A 872 E DT 879 F DT 880 F DT 881 F DT 882 F DA 890 F
|
 |
10 |
 |
1.20 |
1.33 |
158.4 |
-0.98 |
-0.17 |
19.3 |
74 |
7 |
4 |
6 |
10 |
1 |
3 |
0 |
|
 |
11 |
 |
1.18 |
1.33 |
172.8 |
-1.61 |
-0.38 |
23.1 |
77 |
8 |
6 |
4 |
6 |
1 |
3 |
0 |
U 863 E U 864 E DT 887 F
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |