PDBsum entry 1htt Go to PDB code:  Tunnel analysis for: 1htt calculated with MOLE 2.0 PDB id 1htt Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   13 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.42 1.49 39.1 -1.52 -0.24 25.4 77 6 4 2 4 2 0 0   2 1.14 1.77 52.5 -1.41 -0.15 16.9 75 5 5 2 4 4 0 0   3 1.44 1.52 61.0 -0.91 -0.28 17.9 78 7 2 1 6 2 1 0   4 1.68 1.68 34.1 -1.28 -0.15 24.9 76 5 1 1 3 2 0 0   5 1.17 3.87 17.0 0.66 0.77 10.2 78 2 1 1 5 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.