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PDBsum entry 1hr8

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1hr8 calculated with MOLE 2.0 PDB id
1hr8
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.31 2.77 28.6 -1.10 -0.37 23.9 84 3 5 1 4 1 1 0  
2 1.96 2.63 34.5 -1.47 -0.74 7.8 91 1 1 5 2 0 0 0  
3 1.26 1.26 35.6 -0.76 -0.30 14.8 82 5 2 2 2 1 0 0  
4 1.98 2.19 39.5 -1.45 -0.49 16.3 81 2 4 6 2 2 1 0  
5 2.02 2.02 43.0 -1.75 -0.40 13.5 83 3 1 5 3 2 1 0  
6 1.46 1.66 51.0 -1.98 -0.55 19.4 84 4 1 5 0 3 0 0  
7 1.56 2.03 59.8 -1.07 -0.17 10.3 78 3 3 5 5 3 5 0  EPE 489 A
8 1.35 2.91 62.4 -1.21 -0.49 16.8 84 2 4 4 8 2 1 0  
9 1.33 2.46 70.3 -1.79 -0.49 15.3 81 4 5 6 4 3 0 0  
10 2.35 2.46 102.6 -1.02 -0.23 18.6 80 10 8 6 9 2 2 0  
11 1.23 2.59 105.2 -1.43 -0.45 20.4 81 6 9 7 7 6 0 0  
12 1.40 2.89 107.9 -0.95 -0.31 17.6 81 7 7 5 7 5 2 1  
13 1.42 1.49 110.9 -0.50 -0.31 13.5 74 2 7 3 7 3 4 0  
14 1.39 1.47 124.0 -0.44 -0.19 17.9 80 5 8 3 10 4 3 0  
15 1.68 2.70 127.3 -2.16 -0.56 18.9 84 11 8 13 2 3 2 0  
16 1.26 2.66 127.8 -1.04 -0.18 20.3 82 12 8 5 11 4 2 1  
17 1.52 1.50 133.9 -0.64 -0.07 19.0 81 8 8 5 11 3 4 0  
18 1.96 1.97 193.6 -1.89 -0.56 20.0 85 13 8 15 3 2 1 0  
19 1.54 2.31 196.8 -1.70 -0.59 19.7 87 12 9 13 6 3 2 0  
20 1.77 2.66 305.1 -1.16 -0.38 15.5 83 13 17 22 17 3 8 0  
21 1.70 3.53 318.4 -1.06 -0.27 15.2 83 16 16 22 17 5 9 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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