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PDBsum entry 1hjk

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1hjk calculated with MOLE 2.0 PDB id
1hjk
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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12 tunnels, coloured by tunnel radius 13 tunnels, coloured by tunnel radius 13 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.34 18.4 -2.33 -0.57 30.8 87 4 4 2 3 1 0 0  102 SEP A,451 ZN A
2 1.34 23.4 -2.31 -0.52 29.2 85 4 4 2 3 2 0 0  102 SEP A,451 ZN A
3 1.35 24.7 -2.50 -0.63 31.2 88 4 7 3 3 1 0 0  102 SEP A,451 ZN A
4 1.69 8.7 -0.70 -0.42 11.4 73 0 2 0 1 1 0 0  
5 1.64 16.3 0.26 -0.12 8.1 79 1 1 2 3 0 2 0  
6 1.74 9.3 -0.44 -0.23 7.4 73 0 1 0 1 1 1 0  
7 1.68 14.2 -0.55 -0.20 8.7 75 1 1 1 1 1 1 0  
8 1.70 15.3 0.28 -0.03 8.7 79 1 1 2 3 0 2 0  
9 1.31 12.2 1.24 0.51 10.6 71 1 0 2 3 1 0 0  
10 1.38 14.5 0.89 0.41 13.6 74 1 1 1 5 1 0 0  
11 1.76 8.0 0.11 -0.36 2.6 61 0 0 1 1 1 1 0  
12 1.57 6.3 -1.69 -0.60 14.6 71 1 1 1 1 0 0 0  
13 1.65 7.0 0.01 -0.45 4.0 68 0 1 1 1 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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