PDBsum entry 1hdh Go to PDB code:  Tunnel analysis for: 1hdh calculated with MOLE 2.0 PDB id 1hdh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   11 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.05 1.59 24.1 -0.58 -0.03 12.1 80 2 1 1 4 3 0 0   2 1.08 1.60 25.6 -0.57 -0.01 11.9 79 2 1 1 3 3 0 0   3 1.10 1.18 29.0 -1.41 -0.18 23.8 82 5 2 1 5 2 0 0  DDZ 51 B SO4 1529 B 4 1.13 1.21 30.5 -1.37 -0.13 23.6 80 5 2 1 5 3 0 0  DDZ 51 B SO4 1529 B 5 1.10 1.18 32.2 -1.06 0.04 23.1 79 6 1 1 5 4 0 0  DDZ 51 B SO4 1529 B 6 1.18 1.57 33.7 -0.93 0.14 23.3 77 6 1 1 5 5 0 0  DDZ 51 B SO4 1529 B 7 1.15 1.26 31.3 -0.78 0.06 19.9 79 6 1 1 5 4 0 0  DDZ 51 A SO4 1529 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.