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PDBsum entry 1h8h

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Pore analysis for: 1h8h calculated with MOLE 2.0 PDB id
1h8h
Pores calculated on whole structure Pores calculated excluding ligands

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21 pores, coloured by radius 25 pores, coloured by radius 25 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.48 1.52 33.6 -1.09 -0.24 20.7 73 4 4 0 3 1 1 0  
2 1.34 1.69 34.9 -1.25 -0.35 19.7 74 5 5 0 2 1 2 0  
3 1.27 1.50 42.6 -0.73 -0.37 12.6 82 3 5 2 6 0 1 0  
4 1.64 3.04 49.9 -0.77 -0.12 13.4 77 3 7 2 8 3 2 0  
5 3.19 3.18 50.4 -2.60 -0.56 30.0 82 7 7 4 2 1 0 0  
6 1.53 2.22 61.3 -1.03 -0.40 19.4 85 3 5 3 9 1 0 0  
7 2.77 3.67 68.6 -2.12 -0.45 27.1 79 8 5 3 4 2 0 0  
8 1.49 1.47 69.2 -0.89 -0.42 12.1 80 5 6 1 7 1 7 0  
9 2.81 3.75 75.0 -2.06 -0.49 29.2 78 7 8 5 6 1 0 0  
10 1.24 1.25 75.7 -0.66 -0.17 19.4 84 6 8 3 14 3 0 0  ADP 600 D
11 2.83 3.83 97.5 -2.00 -0.44 29.6 80 10 11 5 9 2 0 0  
12 1.49 1.73 99.6 -1.52 -0.48 21.9 84 9 12 4 12 1 3 0  
13 1.62 1.85 103.0 -1.13 -0.34 19.3 83 9 9 5 13 1 3 0  
14 2.84 5.01 104.5 -2.41 -0.53 29.6 82 13 10 6 7 2 0 0  
15 1.48 1.48 107.9 -0.83 -0.33 18.8 80 10 10 2 12 2 3 0  
16 1.61 1.86 112.7 -1.37 -0.38 19.1 85 12 8 6 11 1 3 0  
17 1.51 1.52 116.2 -1.55 -0.52 22.3 83 11 15 3 13 2 3 0  
18 1.24 1.27 115.9 -1.00 -0.21 23.0 81 10 11 5 16 3 0 0  ADP 600 D
19 2.86 5.06 116.6 -2.45 -0.60 30.9 83 12 13 9 9 1 0 0  
20 1.61 1.87 118.2 -1.39 -0.41 20.5 85 11 11 8 13 0 3 0  
21 1.23 1.28 125.6 -1.19 -0.24 22.9 83 13 10 6 14 3 0 0  ADP 600 D
22 1.24 1.27 130.1 -0.82 -0.26 19.5 84 11 14 4 18 2 3 0  ADP 600 D
23 1.52 1.52 131.4 -1.25 -0.42 20.5 81 12 14 4 15 2 3 0  
24 1.54 1.54 141.1 -1.42 -0.45 20.0 83 15 13 5 13 2 4 0  
25 1.25 1.25 145.0 -0.81 -0.30 18.9 83 13 15 2 20 3 3 0  ADP 600 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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