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PDBsum entry 1h5b

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1h5b calculated with MOLE 2.0 PDB id
1h5b
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.77 2.14 22.8 -1.79 -0.41 21.1 83 2 1 5 2 2 0 0  
2 1.77 2.31 24.9 -1.05 -0.62 7.4 90 1 1 8 1 1 0 0  
3 1.78 1.95 29.4 -1.32 -0.51 10.6 91 1 1 8 2 1 1 0  
4 1.77 2.15 31.7 -1.48 -0.38 9.2 83 1 2 8 2 4 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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