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PDBsum entry 1h1v

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Actin-binding PDB id
1h1v
Contents
Protein chains
368 a.a. *
327 a.a. *
Ligands
ATP
Metals
_CA ×5
Waters ×346
* Residue conservation analysis

References listed in PDB file
Key reference
Title The calcium activation of gelsolin: insights from the 3a structure of the g4-G6/actin complex.
Authors H.Choe, L.D.Burtnick, M.Mejillano, H.L.Yin, R.C.Robinson, S.Choe.
Ref. J Mol Biol, 2002, 324, 691-702. [DOI no: 10.1016/S0022-2836(02)01131-2]
PubMed id 12460571
Abstract
Gelsolin participates in the reorganization of the actin cytoskeleton that is required during such phenomena as cell movement, cytokinesis, and apoptosis. It consists of six structurally similar domains, G1-G6, which are arranged at resting intracellular levels of calcium ion so as to obscure the three actin-binding surfaces. Elevation of Ca(2+) concentrations releases latches within the constrained structure and produces large shifts in the relative positioning of the domains, permitting gelsolin to bind to and sever actin filaments. How Ca(2+) is able to activate gelsolin has been a major question concerning the function of this protein. We present the improved structure of the C-terminal half of gelsolin bound to monomeric actin at 3.0 A resolution. Two classes of Ca(2+)-binding site are evident on gelsolin: type 1 sites share coordination of Ca(2+) with actin, while type 2 sites are wholly contained within gelsolin. This structure of the complex reveals the locations of two novel metal ion-binding sites in domains G5 and G6, respectively. We identify both as type 2 sites. The absolute conservation of the type 2 calcium-ligating residues across the six domains of gelsolin suggests that this site exists in each of the domains. In total, gelsolin has the potential to bind eight calcium ions, two type 1 and six type 2. The function of the type 2 sites is to facilitate structural rearrangements within gelsolin as part of the activation and actin-binding and severing processes. We propose the novel type 2 site in G6 to be the critical site that initiates overall activation of gelsolin by releasing the tail latch that locks calcium-free gelsolin in a conformation unable to bind actin.
Figure 1.
Figure 1. Ribbon diagram of gelsolin domains G4-G6 showing the conformational changes on binding calcium and actin. Actin is shown in cyan, G4 in pink, G5 in green, and G6 is painted orange. The left-hand panel shows G4-G6 in a calcium-free conformation.[2.] The right hand panel depicts the actin and calcium-bound form of G4-G6 as reported here. Ca^2+ in the type 1 site on G4 (gold sphere) is sandwiched between G4 and actin. Calcium ions occupy each of the type 2 sites (gray spheres) in all three gelsolin domains.
Figure 2.
Figure 2. Type 1 calcium ion-binding sites. Ca^2+ in type 1 sites in G1 and in G4 is coordinated by Glu167 of actin (cyan). In severin domain 2,[16.] the structure of which was elucidated in the absence of actin, a water molecule (purple) completes the coordination sphere of Ca^2+. This site is characterized by coordination by a conserved aspartic acid at the C-terminal end of the H1 helix and carbonyl oxygen atoms five and seven residues further along the polypeptide chain. Calcium ions are shown as gold spheres.
The above figures are reprinted by permission from Elsevier: J Mol Biol (2002, 324, 691-702) copyright 2002.
Secondary reference #1
Title Domain movement in gelsolin: a calcium-Activated switch.
Authors R.C.Robinson, M.Mejillano, V.P.Le, L.D.Burtnick, H.L.Yin, S.Choe.
Ref. Science, 1999, 286, 1939-1942. [DOI no: 10.1126/science.286.5446.1939]
PubMed id 10583954
Full text Abstract
Figure 2.
Fig. 2. Comparison of the G1 and G4 actin-binding sites. (A) Surface representations of G1 and G4 detailing residues at the actin-gelsolin interface. Charged residues, hydrophobic residues, and nonconserved residues are colored red, yellow, and green, respectively. (B) Actin-bound forms of G1 (5) (red) and G4 (pink) in about the same orientation as in (A) are shown as schematic representations. Bound calcium ions are shown as black spheres. Type 1 calcium ions are labeled 1Ca2+ and type 2 are labeled 2Ca2+.
Figure 4.
Fig. 4. Proposed model of the gelsolin-two-actin complex. Schematic representations of two copies of the G4-G6-actin complex are oriented so that the actin protomers are related according to the Holmes model of the actin filament (9). Gelsolin domains G4, G5, and G6 bound to actin protomer 1 are labeled G1, G2, and G3, respectively. The actin filament is oriented to run vertically in the plane of the paper, indicated by the arrow (cyan) as in Fig. 1A. The COOH-terminus of G3 (labeled C) and the NH[2]-terminus of G4 (labeled N) are 66 Å apart in this model.
The above figures are reproduced from the cited reference with permission from the AAAs
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