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PDBsum entry 1h0h

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1h0h calculated with MOLE 2.0 PDB id
1h0h
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.31 1.57 101.2 -0.63 -0.14 12.8 84 8 5 8 17 3 1 1  SEC 158 A W 1000 A 2MD 1001 A MGD 1002 A
2 1.16 1.47 99.0 -0.44 -0.18 10.4 85 4 4 9 17 2 1 1  SEC 158 K W 1000 K 2MD 1001 K MGD 1002 K
3 1.31 1.30 27.8 0.76 0.26 11.9 85 3 2 1 8 1 1 0  
4 1.41 1.41 18.5 -0.34 0.04 10.6 75 2 1 1 1 2 1 0  
5 1.26 2.25 20.7 0.10 0.41 15.8 68 3 0 0 3 4 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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