PDBsum entry 1gqh Go to PDB code:  Tunnel analysis for: 1gqh calculated with MOLE 2.0 PDB id 1gqh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.49 1.97 21.8 1.18 0.49 2.0 72 0 1 0 4 4 1 0  KOJ 1351 A 2 1.51 1.96 23.2 1.24 0.55 7.8 73 1 2 0 5 4 1 0  KOJ 1351 A 3 1.22 1.88 25.8 1.50 0.76 6.6 70 2 2 0 5 5 1 0  KOJ 1351 A 4 1.63 1.63 21.4 1.95 0.71 9.6 74 1 2 0 9 3 0 0  KOJ 1351 C 5 1.42 1.42 23.1 1.84 0.78 2.9 72 0 1 0 6 5 0 0  KOJ 1351 C 6 1.45 1.45 18.4 1.72 0.86 8.9 69 2 2 0 5 4 0 0  KOJ 1351 B 7 1.27 1.56 16.6 0.55 0.00 3.8 78 0 1 2 1 2 1 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.