spacer
spacer

Ligand clusters for UniProt code P00877

Ligand clusters for P00877: Ribulose bisphosphate carboxylase large chain OS=Chlamydomonas reinhardtii GN=rbcL PE=1 SV=1

Top 6 (of 11) ligand clusters
Cluster 1.
2 ligand types
26 ligands
Cluster 2.
1 ligand type
12 ligands
Cluster 3.
2 ligand types
23 ligands
Cluster 4.
2 ligand types
11 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1gk8A  
 

Structures

PDB   Schematic diagram
1gk8A    
1uwaA    
2vdhA    
2v63A    
2v67A    
 more ...

 

 Cluster 1 contains 2 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: CAP × 13
2-Carboxyarabinitol-1,5-Diphosphate
PDB codes: 1gk8(A), 1uw9(A), 1uzd(A), 1uzh(A), 2v63(A), 2v67(A), 2v68(A), 2v69(A), 2v6a(A), 1ir2(A), 1uwa(A), 2vdh(A), 2vdi(A).

_Mg
 
2. Metal: _MG × 13
PDB codes: 1gk8(A), 1ir2(A), 1uw9(A), 1uwa(A), 1uzd(A), 1uzh(A), 2v63(A), 2v67(A), 2v68(A), 2v69(A), 2v6a(A), 2vdh(A), 2vdi(A).

 

 Cluster 2 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: CAP × 12
2-Carboxyarabinitol-1,5-Diphosphate
PDB codes: 1uw9(A), 1uzd(A), 1uzh(A), 2v63(A), 2v67(A), 2v68(A), 2v69(A), 2v6a(A), 1ir2(A), 1uwa(A), 2vdh(A), 2vdi(A).

 

 Cluster 3 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: EDO × 22
1,2-Ethanediol
PDB codes: 1gk8(A), 1uw9(A), 1uzd(A), 1uzh(A), 2v63(A), 2v67(A), 2v68(A), 2v69(A), 2v6a(A), 1uwa(A), 2vdh(A), 2vdi(A),


 
2. Ligand: GOL × 1
Glycerol
PDB code: 1ir2(A).

 

 Cluster 4 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: EDO × 10
1,2-Ethanediol
PDB codes: 1gk8(A), 1uw9(A), 1uzd(A), 1uzh(A), 2v67(A), 2v69(A), 2v6a(A), 1uwa(A), 2vdh(A), 2vdi(A).


 
2. Ligand: GOL × 1
Glycerol
PDB code: 1ir2(A).

 

 Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: GOL × 1
Glycerol
PDB code: 1ir2(A).

 

 Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: GOL × 1
Glycerol
PDB code: 1ir2(A).

 

spacer

spacer