PDBsum entry 1gj5 Go to PDB code:  Tunnel analysis for: 1gj5 calculated with MOLE 2.0 PDB id 1gj5 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 1.23 24.3 -1.06 -0.63 14.6 70 2 4 1 0 2 0 1  130 410 H 2 1.25 1.25 26.6 -1.31 -0.60 17.2 75 3 3 2 0 2 0 1  130 410 H 3 1.23 1.23 27.2 -0.56 -0.15 10.0 72 2 4 2 2 4 0 0  130 410 H Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.