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PDBsum entry 1ghq

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Immune system/viral protein receptor PDB id
1ghq
Contents
Protein chains
307 a.a. *
129 a.a. *
Ligands
NDG ×2
Metals
_ZN ×2
Waters ×666
* Residue conservation analysis

References listed in PDB file
Key reference
Title Structure of complement receptor 2 in complex with its c3d ligand.
Authors G.Szakonyi, J.M.Guthridge, D.Li, K.Young, V.M.Holers, X.S.Chen.
Ref. Science, 2001, 292, 1725-1728. [DOI no: 10.1126/science.1059118]
PubMed id 11387479
Abstract
Complement receptor 2 (CR2/CD21) is an important receptor that amplifies B lymphocyte activation by bridging the innate and adaptive immune systems. CR2 ligands include complement C3d and Epstein-Barr virus glycoprotein 350/220. We describe the x-ray structure of this CR2 domain in complex with C3d at 2.0 angstroms. The structure reveals extensive main chain interactions between C3d and only one short consensus repeat (SCR) of CR2 and substantial SCR side-side packing. These results provide a detailed understanding of receptor-ligand interactions in this protein family and reveal potential target sites for molecular drug design.
Figure 3.
Fig. 3. Structure at the CR2-C3d interface. (A and B) Surface features of the interface area on C3d (in cyan) and CR2 molecule (in yellow). The shape of the interface of one molecule complements that of the other (prepared using GRASP). (C) Structure of the CR2 SCR2 (yellow) and C3d (cyan) complex. (D and E) The detailed interactions between CR2 (yellow) and C3d (cyan) in two angles. Dashed lines represent H-bonds between carbonyl oxygen atoms (red), nitrogen atoms (blue) of amino acid side chains or main chain, and water molecules (pink).
Figure 4.
Fig. 4. ELISA results demonstrating the relative inhibition of binding of full-length soluble CR2 at 2 µg/ml to plate-bound C3d by wild-type C3d (wt) compared to mutant C3d (mut1, mut2, and mut4) at several concentrations. Wt and mut1 inhibited CR2-C3d binding similarly, whereas mut2 and mut4 have lost most of their inhibitory capabilities and, thus, do not effectively interact with CR2.
The above figures are reprinted by permission from the AAAs: Science (2001, 292, 1725-1728) copyright 2001.
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