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PDBsum entry 1ggu

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Top Page protein metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1ggu calculated with MOLE 2.0 PDB id
1ggu
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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16 tunnels, coloured by tunnel radius 16 tunnels, coloured by tunnel radius 16 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.87 28.2 -1.77 -0.47 22.2 85 2 5 3 3 1 2 0  
2 1.73 35.9 -1.61 -0.59 20.9 86 4 4 3 2 1 1 0  
3 1.75 41.1 -1.35 -0.48 19.2 81 4 5 4 3 2 1 0  
4 1.86 48.5 -2.24 -0.60 28.8 83 4 9 3 3 1 1 0  
5 1.85 51.9 -2.26 -0.60 27.1 83 5 8 4 3 1 1 0  
6 1.86 54.7 -2.17 -0.56 27.0 83 5 8 4 4 1 1 0  
7 1.72 76.9 -1.60 -0.45 18.0 80 8 8 9 2 5 5 0  
8 1.63 12.1 -1.92 -0.64 15.1 79 1 2 2 1 1 0 0  
9 1.41 8.0 0.50 0.16 1.7 75 0 0 0 3 1 2 0  
10 1.34 8.6 0.12 0.23 5.0 73 1 0 0 3 0 2 0  
11 1.30 12.5 -0.67 -0.06 12.7 73 2 0 0 3 0 3 0  
12 1.63 9.5 0.09 -0.25 6.5 70 1 0 0 1 2 0 0  
13 1.47 7.9 -0.53 0.97 10.8 47 0 1 0 1 2 1 0  
14 1.88 3.9 -0.30 0.78 18.0 59 1 0 0 0 2 0 1  
15 1.48 6.3 -1.24 0.51 21.6 73 1 0 0 0 1 0 1  
16 1.36 8.5 -0.64 -0.26 20.3 74 1 2 0 1 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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