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PDBsum entry 1ggt

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Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 1ggt calculated with MOLE 2.0 PDB id
1ggt
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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22 tunnels, coloured by tunnel radius 22 tunnels, coloured by tunnel radius 22 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.10 13.2 -1.03 -0.15 27.0 77 2 3 0 1 1 0 0  
2 1.66 15.5 -1.60 -0.19 31.3 73 4 3 0 1 2 0 0  
3 1.27 16.2 -0.98 -0.24 24.8 77 2 3 0 1 1 0 0  
4 1.27 18.5 -1.47 -0.24 29.3 72 3 3 0 1 2 0 0  
5 2.09 21.5 -1.75 -0.23 29.8 82 3 3 1 1 1 1 0  
6 1.30 24.5 -1.70 -0.27 28.4 82 3 3 1 1 1 1 0  
7 1.93 11.0 -1.47 -0.52 8.1 77 1 1 1 1 1 1 0  
8 1.98 13.5 -1.20 -0.33 10.3 79 1 1 1 3 1 1 0  
9 1.35 3.7 -2.94 -0.23 35.0 70 2 1 0 0 1 0 0  
10 1.39 8.9 -3.01 -0.22 28.8 82 2 2 2 0 1 0 0  
11 1.28 13.3 -1.41 -0.51 18.5 91 2 1 3 3 0 0 0  
12 1.28 17.9 -1.07 -0.43 13.8 93 1 1 3 5 0 0 0  
13 1.40 8.6 -0.73 -0.22 14.8 78 2 0 0 1 1 0 0  
14 1.44 18.0 -1.11 -0.29 19.5 77 3 1 0 1 1 0 0  
15 1.64 10.3 -1.15 -0.55 10.7 98 0 2 3 1 0 0 0  
16 1.41 21.0 0.20 0.02 7.5 66 0 2 0 3 3 0 0  
17 2.13 3.0 -0.20 0.57 16.2 72 1 1 0 2 2 0 0  
18 1.91 6.1 0.25 -0.12 1.7 81 0 0 1 1 1 1 0  
19 1.91 7.2 -0.07 -0.28 2.0 81 0 0 1 1 1 1 0  
20 1.79 11.7 -0.60 -0.51 6.0 79 1 0 0 1 0 1 0  
21 1.87 12.5 -0.42 -0.40 8.0 73 2 0 0 2 0 1 0  
22 1.28 10.1 1.31 0.58 15.8 76 1 1 0 6 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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