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PDBsum entry 1g65

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1g65 calculated with MOLE 2.0 PDB id
1g65
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.97 2.10 74.9 -2.77 -0.42 32.0 77 10 6 3 4 3 1 0  
2 1.52 1.68 77.2 -1.64 -0.52 20.9 81 7 10 7 2 5 3 0  
3 1.52 1.66 81.3 -2.05 -0.58 25.7 82 8 13 6 3 2 1 1  
4 1.68 1.92 86.1 -1.20 -0.22 16.7 82 8 7 10 7 6 1 0  
5 1.54 2.96 94.3 -2.59 -0.58 30.0 81 10 11 7 3 4 1 0  
6 1.11 1.47 99.0 -2.31 -0.47 27.9 77 14 6 5 5 3 2 0  
7 1.45 1.44 101.4 -1.51 -0.25 23.4 83 13 10 8 9 3 0 0  
8 1.45 1.59 100.2 -2.85 -0.46 30.2 80 11 5 9 3 7 0 0  
9 1.86 2.01 121.2 -2.29 -0.41 27.3 79 12 8 6 7 7 1 0  
10 1.10 1.51 119.7 -2.38 -0.46 26.1 80 15 5 11 4 6 1 0  
11 1.54 1.82 124.0 -2.32 -0.39 27.8 80 12 11 8 7 9 0 0  
12 1.14 1.47 140.7 -2.11 -0.42 25.4 80 16 8 8 8 6 2 0  
13 1.37 1.43 140.5 -2.25 -0.50 26.2 83 15 7 10 7 4 3 0  
14 1.46 1.58 143.6 -2.65 -0.51 30.3 81 19 15 10 4 6 1 0  
15 1.73 3.99 159.5 -2.66 -0.52 33.4 79 24 17 5 6 4 2 0  
16 1.63 2.25 164.2 -2.24 -0.43 27.5 81 20 21 10 8 7 1 0  
17 1.56 2.95 170.8 -2.72 -0.57 31.2 80 14 15 7 4 5 1 0  
18 1.93 3.77 174.6 -2.59 -0.41 26.8 82 16 6 10 5 6 1 0  
19 1.49 1.59 180.0 -2.60 -0.41 24.8 84 15 5 16 3 7 0 0  
20 1.93 3.92 182.2 -2.58 -0.38 25.1 81 13 7 12 6 9 0 0  
21 1.94 3.25 187.7 -2.16 -0.36 22.2 83 14 7 12 7 7 1 0  
22 1.45 1.62 193.8 -2.87 -0.42 28.3 82 16 6 16 4 11 0 0  
23 1.59 1.84 196.7 -2.15 -0.36 22.8 84 15 11 14 7 8 0 0  
24 1.43 1.98 201.8 -2.17 -0.33 24.9 82 19 11 14 9 10 0 0  
25 1.23 1.50 202.2 -2.28 -0.39 23.3 81 17 7 14 7 8 1 0  
26 1.14 1.53 221.3 -2.01 -0.33 23.6 82 23 11 16 10 9 1 0  
27 1.66 1.91 219.2 -2.31 -0.35 24.6 81 19 12 16 6 13 1 0  
28 1.37 1.43 249.1 -2.60 -0.46 27.0 81 22 9 16 8 11 3 0  
29 1.72 4.19 242.9 -2.54 -0.45 27.8 81 24 17 13 7 8 1 0  
30 1.19 2.38 272.5 -1.97 -0.32 20.9 81 20 11 18 9 15 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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