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PDBsum entry 1g4b

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 1g4b calculated with MOLE 2.0 PDB id
1g4b
Pores calculated on whole structure Pores calculated excluding ligands

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16 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 1.49 25.2 -2.45 -0.43 31.9 81 4 3 1 2 0 0 0  
2 2.14 2.15 27.1 -1.37 -0.43 20.6 88 5 3 2 1 1 0 0  
3 1.17 1.64 32.5 -0.13 0.08 11.0 81 1 2 2 3 3 1 0  
4 1.21 1.31 44.0 -1.73 -0.29 28.4 84 8 4 2 6 1 0 1  
5 1.47 1.66 60.7 0.20 0.27 18.5 81 6 3 1 11 0 0 0  
6 2.03 3.71 67.6 -0.04 0.15 7.7 80 4 2 2 10 4 2 0  
7 1.37 1.53 75.7 -1.38 -0.10 14.7 85 5 3 6 4 3 1 0  
8 1.84 2.95 78.8 -2.61 -0.56 32.7 85 14 9 4 5 0 1 0  
9 1.83 2.98 79.6 -2.47 -0.46 34.0 81 16 11 3 5 2 1 0  
10 2.05 2.95 84.5 -2.82 -0.47 37.5 83 18 12 2 6 1 1 0  
11 1.43 1.50 84.7 -1.29 -0.19 24.4 83 6 5 2 6 0 2 0  
12 2.00 3.71 101.5 -0.66 -0.18 14.6 83 5 7 5 7 3 1 0  
13 1.41 1.56 102.0 -1.15 -0.31 15.5 83 4 5 6 5 3 1 0  
14 1.53 1.76 128.6 -2.01 -0.32 27.6 83 16 7 5 10 1 1 0  
15 1.23 1.58 140.6 -1.67 -0.37 24.2 82 15 8 5 9 2 1 1  
16 1.56 1.78 191.7 -2.28 -0.44 29.4 81 22 16 6 9 4 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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