PDBsum entry 1g3j Go to PDB code:  Tunnel analysis for: 1g3j calculated with MOLE 2.0 PDB id 1g3j Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.30 2.00 27.0 -1.12 -0.36 22.4 82 3 2 0 5 0 0 2   2 1.16 1.39 31.0 -0.66 -0.22 20.2 82 3 2 0 5 0 0 2   3 1.75 1.82 19.5 -1.30 -0.54 20.0 91 1 1 1 2 0 1 0   4 1.14 1.42 15.3 2.98 0.68 0.9 78 0 0 0 8 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.