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PDBsum entry 1g0d

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Protein chain A PDB id
1g0d
Protein chain A highlighted
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Jmol
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
12 sheets
1 beta alpha beta unit
13 beta hairpins
9 beta bulges
41 strands
14 helices
15 helix-helix interacs
54 beta turns
5 gamma turns
Catalytic residues
Y515-C272-D355-H332
  
Chain (666 residues)

UniProt code: P52181 (TGM2_PAGMA)   [Pfam]

structural classification (4 domains) :
Domain Links CATH no.   Class Architecture
1 2.60.40.10 = Mainly Beta Sandwich
2 3.90.260.10 = Alpha Beta Alpha-Beta Complex
3 2.60.40.10 = Mainly Beta Sandwich
4 2.60.40.10 = Mainly Beta Sandwich

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
CSA annotation:   
    catalytic residue
Residue contacts:   
    to ligand
PDB SITE records:   
 AC1

Jmol
RasMol

FASTA
file
Domain 1
Topology diagram


Hera


Domain 2
Topology diagram


Hera


Domain 3
Topology diagram


Hera


Domain 4
Topology diagram


Hera


  Analysis of sequence's residue conservation
  Related protein sequences in the PDB
  
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