 |
PDBsum entry 1fze
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 1fze calculated with MOLE 2.0
|
PDB id
|
|
|
|
1fze
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
9 tunnels,
coloured by tunnel radius |
 |
9 tunnels,
coloured by
tunnel radius
|
9 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.26 |
1.26 |
15.9 |
-0.71 |
-0.29 |
11.9 |
76 |
 |
2 |
2 |
1 |
1 |
3 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.49 |
2.71 |
25.1 |
-2.10 |
-0.21 |
20.9 |
79 |
3 |
1 |
3 |
2 |
1 |
1 |
0 |
|
 |
3 |
 |
1.27 |
1.27 |
31.2 |
-1.09 |
-0.41 |
16.6 |
72 |
2 |
2 |
1 |
1 |
3 |
0 |
0 |
|
 |
4 |
 |
1.27 |
1.27 |
33.7 |
-0.45 |
-0.23 |
7.5 |
79 |
2 |
1 |
3 |
2 |
3 |
0 |
0 |
|
 |
5 |
 |
1.41 |
1.77 |
15.6 |
0.09 |
0.37 |
15.6 |
93 |
2 |
0 |
2 |
4 |
1 |
0 |
0 |
|
 |
6 |
 |
1.56 |
2.71 |
26.8 |
1.03 |
0.68 |
10.0 |
91 |
2 |
1 |
2 |
9 |
1 |
0 |
0 |
|
 |
7 |
 |
1.55 |
2.66 |
30.3 |
0.79 |
0.48 |
10.1 |
86 |
3 |
1 |
2 |
7 |
2 |
0 |
0 |
|
 |
8 |
 |
1.47 |
1.53 |
33.4 |
0.99 |
0.50 |
7.8 |
86 |
2 |
0 |
2 |
8 |
2 |
0 |
0 |
|
 |
9 |
 |
1.25 |
1.52 |
15.2 |
-1.48 |
-0.04 |
26.4 |
73 |
3 |
3 |
1 |
1 |
3 |
0 |
1 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |