PDBsum entry 1fvd Go to PDB code:  Tunnel analysis for: 1fvd calculated with MOLE 2.0 PDB id 1fvd Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.87 2.55 20.7 -0.98 -0.76 2.4 99 0 0 6 1 1 0 0   2 1.88 2.57 20.9 -0.91 -0.72 4.6 99 1 0 7 1 1 0 0   3 1.40 2.00 15.3 -1.46 -0.73 15.9 99 2 2 3 0 0 0 0   4 1.17 1.26 17.3 -1.26 -0.80 9.1 106 2 0 4 0 0 0 0   5 1.68 1.76 20.6 -0.68 -0.69 2.2 102 0 0 8 1 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.