spacer
spacer

PDBsum entry 1fqn

Go to PDB code: 
Top Page protein tunnels links
Tunnel analysis for: 1fqn calculated with MOLE 2.0 PDB id
1fqn
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.08 8.4 -1.57 -0.03 15.6 82 3 0 1 1 2 1 0  
2 2.50 3.1 -0.87 -0.58 2.1 82 0 0 0 0 0 2 0  
3 1.72 13.5 -0.72 -0.03 10.8 77 2 1 1 0 2 0 0  
4 1.90 21.6 -1.74 -0.41 19.6 76 4 2 1 0 2 0 0  
5 1.69 5.7 1.41 0.13 1.6 91 0 0 0 4 0 0 0  
6 1.70 8.8 -1.83 -0.66 7.2 74 1 0 2 0 0 1 0  
7 2.18 6.9 -0.99 0.07 15.5 58 2 1 0 0 3 1 0  
8 1.60 12.6 -1.42 -0.19 16.3 72 2 0 0 1 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer