PDBsum entry 1fq9 Go to PDB code:  Tunnel analysis for: 1fq9 calculated with MOLE 2.0 PDB id 1fq9 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 1.41 25.9 -2.51 -0.24 29.7 76 9 2 1 1 2 0 0  IDS 6 E SGN 7 E 2 1.29 1.37 26.8 -2.42 -0.28 28.5 77 8 3 1 1 2 0 0  IDS 6 E SGN 7 E 3 1.29 1.35 27.4 -2.32 -0.21 25.5 75 8 1 2 1 2 1 0  SGN 3 E IDS 4 E SGN 5 E IDS 6 E SGN 7 E 4 1.30 1.39 35.9 -1.66 -0.24 24.7 82 7 2 2 3 2 0 0  IDS 6 E SGN 7 E UAP 8 E 5 1.29 1.37 44.7 -2.55 -0.21 34.6 79 17 2 0 3 2 0 0  SGN 7 E UAP 8 E IDS 4 F SGN 5 F UAP 6 F 6 1.34 1.38 48.9 -1.63 -0.20 25.0 84 12 3 3 5 2 0 0  SGN 7 E UAP 8 E SGN 5 F UAP 6 F Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.