spacer
spacer

PDBsum entry 1fkd

Go to PDB code: 
Top Page protein ligands clefts links
Cleft analysis for: 1fkd PDB id
1fkd
View options
Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1413.70 3.65 60.42 7 9.79 1 11.18 1 3 4 1 6 7 0 0 818 108[A] (42 atoms)
2 387.70 0.00 62.50 4 7.58 2 0.00 9 3 2 1 2 0 2 0  
3 401.62 0.00 53.22 9 3.82 8 5.66 3 3 1 2 2 1 0 0  
4 256.92 0.00 56.19 8 4.40 7 5.92 2 2 0 0 2 1 2 0  
5 243.42 0.00 62.70 3 4.72 4 5.20 5 1 3 2 3 0 1 0  
6 181.41 0.00 61.25 6 5.00 3 5.07 6 1 2 1 2 0 1 0  
7 159.89 0.00 66.22 1 4.67 5 0.00 10 3 0 1 0 1 1 0  
8 155.25 0.00 61.37 5 1.72 10 4.37 8 3 2 2 1 0 0 0  
9 113.48 0.00 63.84 2 4.52 6 4.67 7 0 0 4 0 1 3 0  
10 98.72 0.00 51.01 10 2.70 9 5.21 4 2 0 1 0 0 0 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
spacer
spacer