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PDBsum entry 1fj1
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Tunnel analysis for: 1fj1 calculated with  MOLE 2.0
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PDB id
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1fj1
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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10 tunnels,
coloured by tunnel radius |
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10 tunnels,
coloured by
tunnel radius
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10 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.26 |
1.32 |
21.3 |
2.40 |
0.66 |
4.7 |
74 |
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2 |
1 |
0 |
10 |
1 |
0 |
0 |
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2 |
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1.20 |
1.27 |
21.3 |
-0.35 |
-0.22 |
9.1 |
89 |
1 |
0 |
2 |
2 |
0 |
0 |
0 |
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3 |
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1.15 |
3.80 |
28.1 |
1.48 |
0.62 |
8.1 |
78 |
2 |
1 |
1 |
10 |
2 |
0 |
0 |
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4 |
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1.45 |
1.64 |
16.0 |
2.23 |
0.47 |
3.8 |
76 |
1 |
0 |
0 |
8 |
0 |
0 |
0 |
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5 |
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1.48 |
2.27 |
18.8 |
1.44 |
0.35 |
12.3 |
80 |
2 |
1 |
1 |
6 |
0 |
0 |
0 |
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6 |
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1.43 |
1.62 |
20.0 |
1.56 |
0.38 |
11.1 |
79 |
2 |
1 |
1 |
8 |
0 |
0 |
0 |
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7 |
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1.46 |
1.64 |
16.0 |
2.23 |
0.47 |
3.8 |
76 |
1 |
0 |
0 |
8 |
0 |
0 |
0 |
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8 |
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1.48 |
2.25 |
18.9 |
1.41 |
0.36 |
12.8 |
80 |
2 |
1 |
1 |
6 |
0 |
0 |
0 |
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9 |
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1.44 |
1.63 |
20.0 |
1.61 |
0.40 |
11.2 |
79 |
2 |
1 |
1 |
8 |
0 |
0 |
0 |
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10 |
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1.33 |
1.49 |
17.7 |
-0.19 |
-0.25 |
5.5 |
80 |
2 |
0 |
3 |
1 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program