PDBsum entry 1f9d Go to PDB code:  Pore analysis for: 1f9d calculated with MOLE 2.0 PDB id 1f9d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.44 1.44 37.0 -0.78 0.05 11.8 73 2 3 1 4 5 0 0  GLC 2 B GLC 3 B GLC 4 B GLC 5 B 2 1.44 1.44 38.8 -1.05 -0.15 13.0 74 2 3 2 4 4 1 0  GLC 2 B GLC 3 B GLC 4 B GLC 5 B 3 1.45 1.45 50.9 -0.95 0.02 11.4 76 2 5 3 4 7 1 0  GLC 1 B GLC 2 B GLC 3 B GLC 1 C GLC 2 C GLC 3 C 4 2.43 4.17 52.3 -0.76 0.27 9.3 72 2 4 4 4 10 1 0  GLC 1 B GLC 2 B GLC 3 B GLC 4 B GLC 5 B GLC 1 C GLC 2 C GLC 3 C 5 2.21 4.21 61.7 -1.02 0.01 8.2 75 2 4 7 4 9 2 0  GLC 1 B GLC 2 B GLC 3 B GLC 4 B GLC 5 B GLC 1 C GLC 2 C GLC 3 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.