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PDBsum entry 1f8d

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Tunnel analysis for: 1f8d calculated with MOLE 2.0 PDB id
1f8d
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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16 tunnels, coloured by tunnel radius 13 tunnels, coloured by tunnel radius 13 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.50 21.7 -1.26 -0.42 20.3 83 3 3 2 2 1 0 1  0 9AM A
2 1.45 11.5 -2.28 -0.40 31.1 69 1 4 0 1 1 0 0  
3 1.50 21.3 -2.02 -0.43 25.4 67 2 2 1 1 2 1 0  
4 2.91 3.5 -0.43 -0.42 7.9 82 0 2 1 1 0 0 0  
5 1.37 8.2 0.00 0.05 2.6 81 0 0 1 3 1 0 0  
6 1.34 12.7 -1.33 -0.05 17.7 75 2 1 0 2 3 0 0  
7 1.68 3.3 -1.12 -0.76 11.5 92 1 1 0 0 0 0 0  
8 1.48 7.2 -1.75 -0.53 18.8 75 1 1 1 1 1 0 0  
9 1.63 7.5 -2.56 -0.68 29.3 82 2 2 1 0 1 0 0  
10 1.63 8.3 -2.02 -0.53 21.8 82 2 2 1 0 1 0 0  
11 1.50 8.4 -1.40 -0.33 13.6 75 1 1 1 1 1 0 0  
12 1.94 8.4 0.19 -0.48 2.5 79 0 0 0 3 0 1 0  
13 1.43 11.9 -1.59 -0.73 5.9 93 0 1 4 0 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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