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PDBsum entry 1f8d

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Cleft analysis for: 1f8d PDB id
1f8d
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1602.70 1.18 78.40 1 11.28 2 10.18 2 9 6 13 6 3 4 0 9AM 0[A] (20 atoms)
2 1357.59 0.00 59.14 6 7.03 6 9.65 3 8 6 5 1 5 3 0 NAG 1086[A] (6 atoms)
3 1150.03 0.00 63.61 3 12.14 1 7.63 7 4 1 9 2 2 5 0  
4 1257.19 0.00 60.44 4 7.54 5 10.42 1 3 6 5 4 2 2 5  
5 695.67 0.00 58.15 7 11.18 3 9.16 4 3 0 2 3 3 1 0 NAG 1146[A] (4 atoms)
6 788.06 0.00 59.56 5 8.15 4 7.09 8 5 5 3 2 1 2 0  
7 966.52 0.00 57.08 9 5.55 10 6.05 10 4 3 6 6 2 2 0  
8 386.44 0.00 57.20 8 5.76 9 8.45 5 2 2 1 0 2 2 0  
9 452.25 0.00 71.09 2 6.68 7 7.72 6 3 1 3 5 3 3 0  
10 502.88 0.00 52.83 10 5.82 8 6.15 9 4 1 2 1 1 0 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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