PDBsum entry 1f4j Go to PDB code:  Pore analysis for: 1f4j calculated with MOLE 2.0 PDB id 1f4j Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   12 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.54 2.81 47.4 -1.31 -0.42 17.2 85 5 5 7 5 1 2 0   2 1.56 3.22 47.4 -1.14 -0.32 15.7 85 4 4 7 5 1 2 0   3 1.61 2.66 61.4 -1.33 -0.44 17.0 84 5 6 7 7 1 3 0   4 1.59 1.82 71.3 -0.23 -0.30 9.8 87 4 6 6 8 2 4 0   5 1.64 2.84 74.0 -0.38 -0.21 11.7 84 5 4 7 9 3 3 0   6 1.50 1.89 74.0 -0.32 -0.37 10.5 86 3 6 6 9 2 4 0   7 1.54 2.78 74.4 -0.59 -0.26 12.3 86 6 5 8 8 3 3 0   8 1.52 2.24 80.8 -0.71 -0.15 13.7 82 7 4 9 9 4 3 1   9 1.58 2.62 82.1 -0.48 -0.23 11.9 85 6 6 8 9 3 4 0   10 1.65 1.91 108.8 -0.68 -0.24 11.7 80 6 6 9 9 5 6 2   11 1.49 2.92 115.7 -0.98 -0.19 13.5 79 9 5 11 9 6 5 2   12 2.02 2.05 62.9 -0.86 -0.27 15.9 85 8 4 4 6 1 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.