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PDBsum entry 1f40

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Cleft analysis for: 1f40 PDB id
1f40
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1580.34 3.82 61.61 4 10.88 1 11.30 1 5 5 1 7 7 2 0 GPI 108[A] (24 atoms)
2 413.44 0.00 57.38 7 3.78 4 6.23 2 4 2 1 2 1 1 0  
3 229.92 0.00 62.63 3 2.39 6 5.02 6 1 3 2 3 0 1 0  
4 237.52 0.00 59.78 6 5.45 2 5.17 5 1 2 1 2 0 3 0  
5 154.83 0.00 53.44 9 4.59 3 5.57 4 2 1 1 1 2 0 0  
6 107.16 0.00 64.42 1 3.53 5 5.67 3 2 0 0 2 0 2 0  
7 129.94 0.00 61.14 5 1.36 7 0.00 8 1 0 0 2 1 2 0  
8 91.55 0.00 64.18 2 0.71 9 0.00 9 0 0 4 1 0 1 0  
9 87.75 0.00 55.80 8 1.09 8 4.62 7 0 0 4 0 1 3 0  
10 91.55 0.00 47.97 10 0.34 10 0.00 10 3 1 1 0 0 0 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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